rnalysis.general

Description

This module contains general-purpose functions. Those include saving Filter objects and result tables, reading and updating the settings file, parsing common types of genomic feature indices, etc.

Functions

clear_all_cache()
clear_gui_cache()
parse_gene_name_string(string)	Receives a string that contains gene names (like 'daf-2' or 'lin15B').
parse_sequence_name_string(string)	Receives a string that contains sequence names (such as 'Y55D5A.5').
parse_wbgene_string(string)	Receives a string that contains WBGene indices.
print_settings_file()	Print the current setting file configuration.
reset_settings_file()	Resets the local settings by deleting the local settings file.
save_to_csv(df, filename)	save a pandas DataFrame or Filter object to csv.
set_attr_ref_table_path([path])	Defines/updates the Attribute Reference Table path in the settings file.
set_biotype_ref_table_path([path])	Defines/updates the Biotype Reference Table path in the settings file.